Add optional finalization_ms to keep observing a captured root after SIGTERM, record the actual finalizer exit and each signal attempt, and escalate once when needed. Bind the initial root identity to captured ownership and preserve observations through cleanup uncertainty.
Fixes#1253.
Co-authored-by: Mykola Dementiev <[email protected]>
Co-authored-by: N0zoM1z0 <[email protected]>
Retain source URLs, empty connections, and ordered frame streams. Compare same-URL streams without relying on transient request IDs, and compare selected shapes and byte counts only through common known coverage. Malformed binary frames retain known metadata with an unknown byte count.
BREAKING CHANGE: inspect_web_page network.websocket_events is replaced by network.websocket_connections, whose records contain request_id, url, and events. Frame payload_bytes is nullable when decoding cannot establish its size. No legacy alias is retained.
Validation: 78 domain/browser/MCP focused tests, check:fast, docs:check, and real Chrome 154 CDP capture passed. Real capture retained six connections and twelve frames with source URLs and selected shapes. Full browser verifier was interrupted during an unrelated slow scenario stage; its assertions were exercised by the bounded capture proof.
Reuse semantic module provenance for aliases and keep property path segments intact through Electron matching. Reject shadowed names and nested or dotted lookalikes. Reassigned and conditionally initialized module origins remain ambiguous, with their source origins retained.
Add a compiled CLI/stdio MCP regression for windows, preloads, context bridges, IPC operations, pairing, and source ranges. Validate 771 JavaScript domain tests, seven composition tests, the public acceptance workflow, build, and check:fast.
Fixes#1656
Require a caller-owned artifact resource scope for source traversal and Git metadata reads. Preserve cancellation, filesystem reasons, partial entries and bytes, and cleanup observations through import and the CLI. Transfer exact failed file owners at regular-file admission and close boundaries, including multiple failures encountered by Git reference resolution.
Validation: 169 focused tests passed across 26 files; two Windows-only cases skipped. Build, typecheck, lint, formatting, knip, architecture guards, discovery and docs checks passed.
BREAKING CHANGE: Reference source readers and imports require an ArtifactResourceScope. VCS metadata reads return Result, and CLI import failures include observed details and partial evidence.
Keep directory handles under explicit close ownership and retain ZIP and Mach-O admission owners when initialization or cleanup fails. Preserve cancellation and primary failure details, and avoid false successful release after native handle invalidation.
Validation: filesystem ownership, FIFO, archive and reconstruction boundary checks; static and architecture checks; real macOS CLI/MCP bundle workflows. Windows native behavior was not verified.
Keep failed reader, root descriptor, and output-tree cleanup with the caller. Drain admitted work before close, retry the same retained owners, and block new resource work while cleanup is incomplete. Preserve primary failures and complete inventory observations.
Thread ownership through JavaScript reconstruction, the CLI's one-shot scope, MCP server shutdown, verifier scripts, and test fixtures. Remove redundant ownership flags and the unused validated test wrapper.
Validate with 850 passing focused tests across 90 suites (two skipped), targeted classification and cleanup retries, static and unused-code checks, and real macOS CLI/MCP directory, ZIP, and DMG workflows. Native Windows and deep-analysis providers were not verified.
BREAKING CHANGE: Direct artifact inventory/extraction and JavaScript analysis APIs require an explicit caller-owned ArtifactResourceScope. CLI and MCP input contracts are unchanged.
Use the shared nonblocking, no-follow regular-file opener at the source-read boundary and report a nonregular replacement as changed. Keep descriptor identity and extent checks.
The compiled subprocess regression timed out on the baseline and completes without a FIFO writer after this change. Reference reader failure, capacity, cancellation, and import checks pass.
* feat(ghidra): admit set_address_name and set_addresses_names
Ghidra sessions rejected the existing naming tools with "operation is not declared by this provider", so agents had to use annotate_native_function, which returns a complete function dossier per rename and cannot name data addresses.
The Java bridge now names a local function entry (namespace-aware, like annotate_native_function) or creates/renames the primary label at any other mapped address, verifying readback. set_addresses_names applies each address in its own transaction and reports per-address booleans. Both are mutating capabilities: excluded from read-only (Windows P0) handshakes and from snapshot replay.
* fix(ghidra): normalize qualified symbol names and reject empty leaves
Share namespace-aware leaf normalization across functions and primary labels. Invalid qualified leaves now return false for naming operations without marking the provider unavailable; function annotations retain typed invalid-input errors.
Extend real CLI/MCP namespace verification with namespaced globals, readback replay, failed-name rollback, mixed batches, and capability checks.
Validation: 75 focused tests and npm run check pass. Ghidra 12.1.4/JDK 21 namespace verification passes on macOS arm64 with unchanged source bytes and complete cleanup. The full host lane passes this workflow before the existing entry-alias fixture fails because the compiler places its interior label at the function entry.
---------
Co-authored-by: morluto <[email protected]>
Retain the original owned-command cleanup failure and one captured-output copy while preserving cleanup resources, truncation and retry semantics.
Verify socket release after cancelled CDP cleanup while retaining the independent detach regression.
Validation: 167 tests across 13 files, all eight local gates, real small Chrome/EVM CLI and pinned-SDK MCP controls, and 20/20 exact-head CI checks.
Give Ghidra and Hopper an 8 MiB aggregate retained-output budget while continuing to drain their process pipes. Expose total observed bytes at the supervisor boundary and retained bytes plus explicit truncation in provider diagnostics.
Redact known transport tokens even when the retained prefix ends inside one, preserving adjacent caller path/query evidence. Existing partial-launch and cleanup ownership remain intact.
Validation: 285 tests across 34 focused suites passed; the final cutoff-fixture refinement passed all 31 Ghidra/Hopper diagnostic tests. check:fast and architecture guards passed. Provider fixtures use real child processes; real Ghidra/Hopper applications were not verified.
Resolve current paths and JVM options and rehash source identities for each request. Probe Java modules and engine capabilities only when creating a new session; remove the superseded full configuration resolver.
Focused configuration, session retirement, cancellation, cleanup and Android MCP boundaries passed. The 34-operation retained session now performs one prerequisite probe. Protocol fixtures do not establish real JADX or JDK performance.
* fix(javascript): accept the Wakaru 1.x release line and verify 1.14.0
Exact --version equality rejected every Wakaru build except 1.13.0, and
strict report schemas rejected any added field, so each upstream release
broke recovery until REA re-pinned. Wakaru now documents that --version,
--json and provenance.json change only by addition within a major version.
Admit ^1.13.0 with the verified/compatible split used for Binwalk and
Unblob, report the observed version instead of the pinned constant, and
add a limitation for unverified releases. Parse reports with loose
objects and keep the reported module status as a string; path, identity,
range and file-set checks stay exact.
Move the audited pin, submodule, CI binary and verifier to 1.14.0, and
document where to get the binary from the refusal message.
* fix(javascript): project known Wakaru warning fields
---------
Co-authored-by: morluto <[email protected]>
* refactor(setup): resolve skill destinations per client
* fix(setup): honor active client configuration and skill roots
* fix(setup): validate effective client scopes and Gemini trust
* fix(setup): treat empty OpenCode overrides as unset
An empty OPENCODE_CONFIG_DIR now stays on the XDG directory, and doctor
and setup inspect global OpenCode files when a custom directory is absent.
Uninstall reports one status per client so a missing earlier layer does
not hide a removed registration.
---------
Co-authored-by: Cursor Agent <[email protected]>
* feat: add Hermes as a supported MCP client
Hermes Agent reads stdio MCP servers from `mcp_servers.<name>` in
`config.yaml`. REA had no Hermes client, so setup could not register it and
Hermes users had to wire the server up by hand.
- SupportedClients: add the `hermes` format and client definition, resolving
the config path from HERMES_HOME, else the platform default that Hermes's own
resolver uses (LOCALAPPDATA/hermes on Windows, ~/.hermes elsewhere), including
HERMES_DATA_DIR_SUFFIX.
- ClientConfigurationDocument: parse and serialize Hermes YAML, upserting the
rea entry into the parsed document so user comments and unrelated settings are
preserved; emit `enabled: true` since Hermes connects entries unless disabled.
- ClientRegistrationStatus: forward the Hermes location variables so status
checks resolve the same path as setup.
- Tests: cover path resolution on both platforms and the register/read/uninstall
round trip, and clear the Hermes location variables between tests.
- delilah 🌸
* docs: document the Hermes client and its config path
- delilah 🌸
* refactor(setup): resolve skill destinations per client
* fix(setup): install Hermes skills in the active profile
* fix(setup): identify each client skill action uniquely
---------
Co-authored-by: morluto <[email protected]>
Include the full stop disposition in the fixture assertion message, so incomplete owned teardown retains its typed reason in Vitest failure reporters. Preserve the existing cleanup requirement without retries or relaxed ownership checks.
Seven process-boundary tests, full serial typecheck/lint/duplication/format checks, and 19 final-head CI checks pass after integrating the combined-main fixture fix. A controlled failure-rendering probe verifies that the explicit message preserves the reason. The original CI cleanup failure remains unreproduced; this is diagnostic work with a synthetic JADX producer, not a root-cause or real-engine fix.
Refs #1441, #1446, #1448, #1065.
Validate the target-free probe against the named definition discovered from the complete production catalog. Preserve initialized server and inventory observations when the SDK rejects the probe, and retain the schema failure reason, absolute deadline and owned-child cleanup.
The negative stdio replay regression fails on original main and passes the fix; actual production-boundary fault injection confirms rejection. Nine doctor/help tests, serial full static checks and real small-target CLI/MCP parity pass. Successful doctor reports remain byte-identical. No performance or model-token reduction is claimed.
Closes#1454. Refs #1065, #723, #1433.
inspect_binary_layout and inspect_recorded_crash passed the decoded report
as both result and rawResult, so every Evidence record carried the whole
report twice (and an MCP response four times, counting its text copy).
The decoded report is the only representation, so raw_result is now null,
as for other single-representation operations.
The real pwntools verifiers asserted the duplicate; they now assert null.
Co-authored-by: Claude Opus 5.5 <[email protected]>
compare-web-captures and compare-web-screenshots parsed their arguments as
inline JSON only, unlike every other JSON-input command. Screenshot
artifacts and scenario captures embed base64 PNG bytes, so a typical
viewport screenshot exceeds the command-line length limit (128 KiB per
argument on Linux, 1 MiB total on macOS) and could not be compared from
the CLI at all, while MCP accepts it. A file path was reported as
malformed JSON, and screenshot schema failures returned no issues.
Each argument now accepts inline JSON or a JSON file path through
parseCliJsonInput; file failures keep its path diagnostics, malformed
inline JSON keeps the field issue, and screenshot validation reports
projected schema issues. The tests share one CLI JSON process fixture.
Co-authored-by: Claude Opus 5.5 <[email protected]>
Retain primitive and nested array types with typed paths, and compare only mutually observed body shapes while preserving selected coverage uncertainty. Return full untrusted WebMCP input declarations with canonical digests, without resolving references or invoking tools.
BREAKING CHANGE: JSON shape paths now contain typed property and array-element segments. WebMCP input_schema_shape is replaced by input_schema and input_schema_sha256, retaining declared examples and defaults.
Share parser modes and collision-free composite keys, enforce architecture guards, and consolidate redundant unit assertions into filesystem, CLI, MCP, and producer-backed workflows. Preserve concurrent upstream boundary fixes and exclude legacy Objective-C class-name bookkeeping labels.
Validation: source/composition suites (3358 passing), focused canonical digest and MCP checks, typecheck/lint, Knip, formatting, architecture guards, and real Foundation archive and Apple legacy simulator CLI/MCP verification. No real Hopper, Ghidra, or IDA verification claim.
BREAKING CHANGE: Filesystem digest omission entries now require system_code; budget and changed-file omissions use null, and unavailable-file omissions preserve the operating-system error code.
Reject omitted segment bounds, procedure classification and body facts, unresolved-call observations, dossier facets, and Ghidra parameter flow metadata. Providers emit explicit nulls for unsupported facets. Verify those unknowns in the real Hopper workflow.
BREAKING CHANGE: Provider analysis outputs must explicitly supply metadata previously repaired with defaults; unsupported nullable facets must be reported as null.
Verify selected files through a nonblocking opened handle before reading. Preserve regular-file symlinks and return actionable CLI/MCP diagnostics without publishing output.
Co-authored-by: YouWish <[email protected]>
After #1301 merged, main's duplicated-line share rose to 2.503%, over
jscpd's 2.5% threshold, so Static checks fail on every PR. The new OMP
test repeated the dialect test's imports and npx registration command.
Export that command from the shared client test fixture instead.
Co-authored-by: Claude Opus 5.5 <[email protected]>
* feat(setup): register OMP during setup
Add OMP (oh-my-pi) as a setup, doctor and uninstall client. Setup writes
a type: stdio entry to the user-level agent mcp.json that OMP reads,
following PI_CONFIG_DIR, an absolute PI_CODING_AGENT_DIR and the
OMP_PROFILE/PI_PROFILE named profile. It removes rea from OMP's
disabledServers denylist, which would otherwise hide the registration,
and doctor reports a listed registration as stale.
Closes#1257
Co-Authored-By: Claude Opus 5.5 <[email protected]>
* fix(setup): honor OMP's enabledServers allowlist in doctor
OMP's user enabledServers allowlist forces an entry with enabled: false
on, unless disabledServers also lists it. Doctor reported such a working
registration as stale. Also format the FAQ client list.
Co-Authored-By: Claude Opus 5.5 <[email protected]>
* fix(setup): keep OMP's allowlisted entry in update maintenance
rea update skipped an owned OMP entry with enabled: false even when
OMP's enabledServers allowlist runs it. Apply the same forced-enable rule
as doctor. Share the client-location environment reset across the client
tests instead of repeating it in each file.
Co-Authored-By: Claude Opus 5.5 <[email protected]>
---------
Co-authored-by: Claude Opus 5.5 <[email protected]>
* fix(mcp): deliver tool errors within advertised schema contracts
Retain complete typed JSON error content while omitting non-conforming
structured errors at the public transport boundary. Recover oversized
diagnostics into Evidence before removing their private structured carrier.
Update schema-validated client readers and cover actual stdio delivery.
Closes#1261
Assisted-by: Kogasa (gensokyo-skills:kogasa-surprise-testing)
* test(mcp): read typed errors in canonical Evidence regressions
* test(mcp): validate public error diagnostics in acceptance workflows
Remove getter, enum, cloned-projection, cache-identity, and obsolete profile assertions along with the shadow JSON Schema engine and dead test-only APIs. Retain producer, filesystem, SDK, lifecycle, integrity, and malformed-format coverage.
Document the priority of real end-to-end workflows, boundary integration, and producer goldens.
Deliver complete Evidence directly through MCP with required nullable analysis profiles and immutable per-server delivery settings. Bind selected environments at construction and require typed cleanup outcomes with retained retry ownership.
Remove test-only routing, duplicate session and snapshot metadata, producer-field repairs, and ambiguous provider arguments. Separate artifact byte identity from occurrence classification and retain typed source-map and partial native facts across CLI, MCP, and verifier consumers.
BREAKING CHANGE: obsolete Evidence envelopes, session aliases, incomplete snapshots, and missing normalized producer facts are no longer accepted.
Propagate CLI interrupts to capture and interrupt post-exit settlement
without cancelling owned-resource cleanup or discarding prior observations.
Assisted-by: Kogasa (gensokyo-skills:kogasa-surprise-testing)
* perf(hopper): resolve string search records once per query
search_strings called _string_inventory(document) once per match, and each
call sorts every string address and rebuilds the record dict, so a query cost
O(matches x strings log strings). Resolve the inventory once per search.
Warm search, 50% matches, fake document, best of 7: 1000 strings 186 -> 0.5 ms,
4000 strings 3161 -> 2.1 ms, 8000 strings 13121 -> 4.9 ms; output byte-identical.
* perf(hopper): skip record resolution for empty string searches
Resolving the full string inventory for a query with no matches added a sort
of every string address that the previous code never performed. Return early
when nothing matches. Zero-match search on a warm document, best of 7:
64000 strings 35.9 ms before this change, 4.0 ms after (main: 3.9 ms).
* fix(ghidra): classify modern Swift manglings in swift type analysis
Categorize modern Swift 4.2+ manglings ($s, _$s) instead of dropping them
in analyze_swift_types. The classifier only accepted the legacy _Tt marker,
so procedure names reported by current providers produced an empty inventory.
Legacy _Tt families and behavior are unchanged. Fixes#1187.
* fix(swift): retain provider aliases and category unknowns
---------
Co-authored-by: Saim Shafique <[email protected]>
Co-authored-by: morluto <[email protected]>
Add explicit summary, facet, item and paged views of retained analysis Evidence without repeating analysis. Preserve captured observations, graph validation, artifact identity, coverage and complete default results.
Fixes#1050
Verified with focused source, CLI, pinned-SDK schema and MCP tests, serial static checks, and one complete native Windows Notion ASAR workflow. Real Hopper/Ghidra verification was not performed for this provider-independent projection change.
Co-authored-by: Matt Van Horn <[email protected]>
morluto