Commit Graph
564 Commits
Author SHA1 Message Date
zayd / coldandmorluto f970b886aa feat: add Hermes as a supported MCP client (#1403)
* feat: add Hermes as a supported MCP client

Hermes Agent reads stdio MCP servers from `mcp_servers.<name>` in
`config.yaml`. REA had no Hermes client, so setup could not register it and
Hermes users had to wire the server up by hand.

- SupportedClients: add the `hermes` format and client definition, resolving
  the config path from HERMES_HOME, else the platform default that Hermes's own
  resolver uses (LOCALAPPDATA/hermes on Windows, ~/.hermes elsewhere), including
  HERMES_DATA_DIR_SUFFIX.
- ClientConfigurationDocument: parse and serialize Hermes YAML, upserting the
  rea entry into the parsed document so user comments and unrelated settings are
  preserved; emit `enabled: true` since Hermes connects entries unless disabled.
- ClientRegistrationStatus: forward the Hermes location variables so status
  checks resolve the same path as setup.
- Tests: cover path resolution on both platforms and the register/read/uninstall
  round trip, and clear the Hermes location variables between tests.

- delilah 🌸

* docs: document the Hermes client and its config path

- delilah 🌸

* refactor(setup): resolve skill destinations per client

* fix(setup): install Hermes skills in the active profile

* fix(setup): identify each client skill action uniquely

---------

Co-authored-by: morluto <[email protected]>
2026-10-10 16:03:25 +08:00
易良andmorluto aa23ec883f feat(clients): register Qwen Code during setup (#1415)
* feat(clients): register Qwen Code during setup

* fix(clients): honor Qwen home and shared skill discovery

---------

Co-authored-by: morluto <[email protected]>
2026-10-10 15:12:09 +08:00
Kaoru0822 eeb83f6581 perf(cli): defer Playwright and isomorphic-git until a command needs them
Load browser composition after CLI scenario validation and load Git support only for local reference trees with Git metadata. Preserve default outputs and actual command behavior.

Refs #1065.

Co-authored-by: Kaoru0822 <[email protected]>
2026-10-10 13:16:44 +08:00
Ysopwnable f4a0c1ce95 fix(javascript)!: avoid event payload copies in graph metadata (#1427)
Share the canonical string identity rule with endpoint projection, scope event keys to each emitter, and keep complete event/listener names in properties. Verify real CLI and stdio MCP with large names, registration/removal, distinct emitters, exact name seeds, reserved-prefix values, and unresolved dynamic names.

BREAKING CHANGE: New analyses use digest-based IDs for long or reserved-prefix event names and shorter event/listener display labels. Select IDs from the parent graph and read exact names from event_name properties. Stored graphs and their original IDs remain accepted for semantic tracing.
2026-10-10 12:20:05 +08:00
jhuang-twandN0zoM1z0 a9ee2360fd feat(native): inspect oversized retained function dossiers via bounded views
Add caller-selected native dossier facets with preserved Evidence identity, provenance, unknowns and transport recovery.

Refs #1247 and #1065.

Co-authored-by: jhuang-tw <[email protected]>
Co-authored-by: N0zoM1z0 <[email protected]>
2026-10-10 12:18:50 +08:00
Ysopwnable 98022a8352 fix(javascript)!: avoid endpoint payload copies in graph metadata (#1423)
Keep exact endpoint observations and request properties while using compact display labels and collision-safe canonical value digests for long artifact-local endpoint keys. Verify real CLI/stdio MCP tracing and version comparison without truncating evidence.

BREAKING CHANGE: New analyses use compact endpoint labels and digest-based IDs for long or reserved-prefix endpoint keys. Select IDs from the parent graph and read full values from endpoint properties. Previously stored graphs retain their original identities and remain valid workflow inputs.
2026-10-10 12:02:24 +08:00
Ysopwnable 4d8ef3f350 perf(javascript): aggregate semantic family coverage once (#1410)
Reduce repeated semantic relation and unknown family scans while preserving exact complete Evidence and coverage.
2026-10-10 11:30:42 +08:00
Ysopwnable de8fc67195 fix(javascript): retain shorter literal metadata encodings (#1408)
Choose the shorter complete JSON or digest key and string display label.
Short values keep their existing identities and labels, while large values
retain the payload-copy reduction without an arbitrary truncation limit.
2026-10-10 11:23:47 +08:00
Ysopwnable 8550913cda fix(javascript)!: stop copying literals into semantic metadata (#1407)
Commit literal values with canonical JSON SHA-256 in semantic role keys
and use a type label for strings. Preserve complete values, provenance and
literal queries while avoiding two payload copies in each string node.

Verify real compiled CLI/default stdio MCP, typed union seeds, empty
strings and trace continuation with a large source-owned fixture.

Refs #723

BREAKING CHANGE: Newly produced semantic literal node IDs use
value-sha256 role keys, and string labels read "string literal". Read exact
values from properties.value and obtain node IDs from the selected parent
graph. Previously stored Evidence and its original IDs remain valid.
2026-10-09 20:00:53 -07:00
Kaoru0822andClaude Opus 5.5 7623e21ff0 perf(native): record pwntools diagnostics once in their Evidence (#1404)
inspect_binary_layout and inspect_recorded_crash passed the decoded report
as both result and rawResult, so every Evidence record carried the whole
report twice (and an MCP response four times, counting its text copy).
The decoded report is the only representation, so raw_result is now null,
as for other single-representation operations.

The real pwntools verifiers asserted the duplicate; they now assert null.

Co-authored-by: Claude Opus 5.5 <[email protected]>
2026-10-09 20:00:11 -07:00
Kaoru0822andClaude Opus 5.5 499e2f54ef perf(evidence): stop copying normalized results into raw_result (#1402)
createAnalysisExecution defaulted an omitted rawResult to a second
complete copy of the result. Every caller that had no distinct provider
representation therefore doubled its Evidence: decode_interface_builder,
inspect_keyed_archive, inspect_asset_catalog, trace_dylib_resolution,
inspect_native_dispatch_metadata, observe_native_calls,
observe_native_ui/capture_native_ui_scenario (including screenshots), and
small Ghidra/IDA lifecycle records. Sibling operations of the same
providers already recorded null.

An omitted rawResult now records null. Normalized results are unchanged.
MCP responses repeat Evidence in text and structured content, so each
response and its share of the 10 MiB transport budget shrink by the same
half; e.g. trace_dylib_resolution on a real app bundle drops from
3,217,119 to 1,612,524 bytes per representation.

Co-authored-by: Claude Opus 5.5 <[email protected]>
2026-10-09 19:52:54 -07:00
Akshit Khokhani d0e606930a fix(javascript): honor module-sync package exports (#1361) 2026-10-10 06:49:43 +08:00
morluto 4bcea1aa76 fix(javascript): retain array identity after length mutations
Keep unknown element coverage on arrays whose length may have changed, preserving intrinsic length presence and subsequent slot mutations through semantic graph and export-return consumers.
2026-10-10 06:20:28 +08:00
morluto 392f1f3107 refactor: consolidate boundary semantics and prune redundant tests
Share parser modes and collision-free composite keys, enforce architecture guards, and consolidate redundant unit assertions into filesystem, CLI, MCP, and producer-backed workflows. Preserve concurrent upstream boundary fixes and exclude legacy Objective-C class-name bookkeeping labels.

Validation: source/composition suites (3358 passing), focused canonical digest and MCP checks, typecheck/lint, Knip, formatting, architecture guards, and real Foundation archive and Apple legacy simulator CLI/MCP verification. No real Hopper, Ghidra, or IDA verification claim.
2026-10-10 05:56:01 +08:00
morluto 614fb7681e fix(evidence): order canonical projections independently of locale 2026-10-10 05:13:53 +08:00
morluto abf5e243c4 fix(update): preserve disabled client registrations 2026-10-10 05:13:53 +08:00
Ysopwnable 53ed942a85 fix(mcp): preserve JavaScript workflow identity validation (#1366)
Preserve canonical distinct-source and unique-native-observation refinements after resolving inline or retained JavaScript workflow inputs. The shared application entry points now return structured invalid_request errors before graph parsing and computation, avoiding another complete graph capture.

Six focused tests, actual compiled CLI/SDK stdio workflows, JSON Schema dialect checks, static/document checks, and a real Notion ASAR analysis/recovery/trace/close workflow passed. All 20 final-head checks, including real JavaScript recovery, passed. Native-provider acceptance is not claimed for this provider-neutral validation change.

Fixes #1364
Refs #1065
2026-10-10 05:11:38 +08:00
Ysopwnable 6ce3288f3b fix(cli): stream JSON inputs beyond the whole-document string limit (#1360)
Stream large CLI JSON files through a strict UTF-8 decoder and standard JSON parser using the same admitted regular-file handle. Preserve native parsing for small inputs, typed malformed-input/resource/access-denied errors, cancellation, and complete Evidence.

Verified with focused public CLI regressions, a 768 MB whitespace-padded valid request, and the Windows native decoder boundary. Individual strings and the assembled object graph remain subject to native runtime limits. All 27 final-head checks passed.

Refs #1331
2026-10-10 04:53:09 +08:00
morluto 7829b1aeef fix(filesystem): reject unstable artifact targets 2026-10-10 04:14:54 +08:00
morluto 37fcea78ce fix(cli): avoid duplicate primary cleanup diagnostics 2026-10-10 04:02:41 +08:00
morluto ac356c46ad test(javascript): share semantic graph test facts 2026-10-10 04:02:41 +08:00
morluto 006b295f1d refactor(javascript): parse runtime evidence into one verified owner 2026-10-10 03:52:35 +08:00
morluto 218c13160e fix: report malformed application evidence as input errors 2026-10-10 03:52:35 +08:00
morluto 55a46f7c71 fix(javascript): resolve query-only HTML references to their document 2026-10-10 03:52:35 +08:00
morluto a4ba8aecd5 fix(contracts)!: require observed provider output metadata
Reject omitted segment bounds, procedure classification and body facts, unresolved-call observations, dossier facets, and Ghidra parameter flow metadata. Providers emit explicit nulls for unsupported facets. Verify those unknowns in the real Hopper workflow.

BREAKING CHANGE: Provider analysis outputs must explicitly supply metadata previously repaired with defaults; unsupported nullable facets must be reported as null.
2026-10-10 03:52:13 +08:00
morluto e3bbb9ac45 refactor(javascript)!: share semantic evidence at fact construction
Intern shared provenance in a graph-scoped context registry while retaining exact locations on every fact. Semantic traces carry their referenced context subset, and portable graph validation rejects stale or dangling commitments.

BREAKING CHANGE: Semantic graph facts now store evidence context IDs and locations. Graph and semantic trace results require an inline evidence_contexts table.
2026-10-10 03:52:13 +08:00
Ysopwnable 9c4a68bc19 fix(json): preserve runtime limits across JSON file readers (#1350)
* fix(cli): preserve runtime JSON string-limit diagnostics

* test(json): check actionable oversized Evidence recovery

* fix(json): decode large UTF-8 inputs by character length

* test(json): reject truncated UTF-8 after large input decode
2026-10-09 19:39:35 +00:00
morluto c867bcd0aa test(javascript): share primitive expansion producer fixtures 2026-10-10 02:49:46 +08:00
morluto 449d57075e refactor(javascript)!: remove obsolete scope truncation statistic
BREAKING CHANGE: remove the never-incremented truncated_scopes statistic from JavaScript application analysis results and schemas.
2026-10-10 02:49:46 +08:00
morluto b4a19193fe fix(setup): install the skill for Claude Code 2026-10-10 02:49:46 +08:00
morluto ed8fcae94b fix(javascript): store source map URLs once 2026-10-10 02:49:46 +08:00
morluto 7915ee5178 feat(javascript): record Electron integrity mismatches 2026-10-10 02:49:46 +08:00
morluto f0dc233d64 fix(setup): recognize supported Nobara hosts 2026-10-10 02:49:46 +08:00
morluto db171be6e5 fix(javascript): preserve agreeing module provenance 2026-10-10 02:49:46 +08:00
You Wish 5f16124a31 fix(files): reject nonregular capture and JSON inputs
Verify selected files through a nonblocking opened handle before reading. Preserve regular-file symlinks and return actionable CLI/MCP diagnostics without publishing output.

Co-authored-by: YouWish <[email protected]>
2026-10-10 01:49:54 +08:00
morluto 3e19875c7f fix(javascript): retain unresolved value frontiers in provenance queries 2026-10-10 01:45:01 +08:00
morluto b628bba1fa refactor(javascript): normalize erased expression syntax once 2026-10-10 01:45:01 +08:00
AC 7a4f2685d4 fix(javascript): reject invalid package exports configurations 2026-10-10 01:45:00 +08:00
AC 2b4abbf1cc fix(javascript): distinguish prefix-only builtins from packages 2026-10-10 01:45:00 +08:00
Rudy Celekli 9055bd695b fix(javascript): avoid positive-zero evidence for signed zero 2026-10-10 01:45:00 +08:00
Rudy Celekli e995b19f83 fix(javascript): preserve semantic evidence through satisfies 2026-10-10 01:45:00 +08:00
Rudy Celekli 4896adcd0f fix(javascript): parse declaration artifacts in ambient mode 2026-10-10 01:45:00 +08:00
morluto 87f0051496 refactor(providers): use canonical artifact and managed identities 2026-10-10 00:49:14 +08:00
morluto 35f121f4ac fix: retain completed observations when later analysis steps fail 2026-10-10 00:35:17 +08:00
morluto e11f4d371a fix(mcp): admit composed analysis through result bookkeeping 2026-10-10 00:35:17 +08:00
morluto f3c4a332f7 fix(targets): cancel resolution before provider admission 2026-10-10 00:35:17 +08:00
Kaoru0822andClaude Opus 5.5 8b4c359135 feat(setup): register OMP during setup (#1301)
* feat(setup): register OMP during setup

Add OMP (oh-my-pi) as a setup, doctor and uninstall client. Setup writes
a type: stdio entry to the user-level agent mcp.json that OMP reads,
following PI_CONFIG_DIR, an absolute PI_CODING_AGENT_DIR and the
OMP_PROFILE/PI_PROFILE named profile. It removes rea from OMP's
disabledServers denylist, which would otherwise hide the registration,
and doctor reports a listed registration as stale.

Closes #1257

Co-Authored-By: Claude Opus 5.5 <[email protected]>

* fix(setup): honor OMP's enabledServers allowlist in doctor

OMP's user enabledServers allowlist forces an entry with enabled: false
on, unless disabledServers also lists it. Doctor reported such a working
registration as stale. Also format the FAQ client list.

Co-Authored-By: Claude Opus 5.5 <[email protected]>

* fix(setup): keep OMP's allowlisted entry in update maintenance

rea update skipped an owned OMP entry with enabled: false even when
OMP's enabledServers allowlist runs it. Apply the same forced-enable rule
as doctor. Share the client-location environment reset across the client
tests instead of repeating it in each file.

Co-Authored-By: Claude Opus 5.5 <[email protected]>

---------

Co-authored-by: Claude Opus 5.5 <[email protected]>
2026-10-09 08:51:12 -07:00
morluto 765e809e36 refactor: use canonical implementations and types directly
Remove forwarding wrappers and shadow aliases, migrate callers and verification scripts to their owners, and share one exhaustive semantic resource-bound projection.
2026-10-09 23:35:19 +08:00
morluto ad59531a96 refactor: remove forwarding exports and redundant aliases 2026-10-09 22:46:09 +08:00
morluto 73e98b2516 fix(javascript): preserve alias and container uncertainty 2026-10-09 22:46:08 +08:00